Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Syngap1F6SEU4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Syngap1F6SEU4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.34□□□□□ -0.27
Syngap1F6SEU4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Syngap1F6SEU4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Syngap1F6SEU4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Syngap1F6SEU4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Syngap1F6SEU4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Syngap1F6SEU4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm12419-201ENSMUST00000116649 636 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm8199-201ENSMUST00000121323 823 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm26368-201ENSMUST00000157826 118 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm8343-201ENSMUST00000182705 994 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm2965-201ENSMUST00000198365 343 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm5805-201ENSMUST00000072779 456 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Syngap1F6SEU4 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Gm11509-201ENSMUST00000117358 325 ntBASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Gm12857-201ENSMUST00000117678 592 ntBASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Syngap1F6SEU4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Syngap1F6SEU4 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms