Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm12887B1AVM1 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.52□□□□□ -0.88
Gm12887B1AVM1 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm12887B1AVM1 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm12887B1AVM1 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Gm12887B1AVM1 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm12887B1AVM1 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm12887B1AVM1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm15610-201ENSMUST00000120584 195 ntBASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm14441-201ENSMUST00000121960 540 ntBASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm4271-201ENSMUST00000174444 973 ntBASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm12887B1AVM1 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm14247-201ENSMUST00000120950 237 ntBASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm22331-201ENSMUST00000158066 136 ntBASIC9.51□□□□□ -0.89
Gm12887B1AVM1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm24196-201ENSMUST00000179161 110 ntBASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm12887B1AVM1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms