Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.33□□□□□ -0.44
Scn1aA2APX8 Gm43002-201ENSMUST00000200310 155 ntBASIC12.33□□□□□ -0.44
Scn1aA2APX8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn1aA2APX8 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm11700-201ENSMUST00000119409 403 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm15615-201ENSMUST00000118876 198 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm16071-201ENSMUST00000119589 793 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm17826-201ENSMUST00000189720 798 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm44506-201ENSMUST00000206278 965 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Gm45550-201ENSMUST00000209380 946 ntBASIC12.32□□□□□ -0.44
Scn1aA2APX8 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scn1aA2APX8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Gm8737-201ENSMUST00000122208 642 ntBASIC12.31□□□□□ -0.44
Scn1aA2APX8 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.31□□□□□ -0.44
Scn1aA2APX8 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.31□□□□□ -0.44
Scn1aA2APX8 Gm35960-201ENSMUST00000202712 767 ntBASIC12.31□□□□□ -0.44
Scn1aA2APX8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn1aA2APX8 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.31□□□□□ -0.44
Scn1aA2APX8 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.31□□□□□ -0.44
Scn1aA2APX8 Gm5451-201ENSMUST00000080545 579 ntBASIC12.31□□□□□ -0.44
Scn1aA2APX8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn1aA2APX8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.31□□□□□ -0.44
Scn1aA2APX8 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.31□□□□□ -0.44
Scn1aA2APX8 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn1aA2APX8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm11246-201ENSMUST00000120880 345 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm23771-201ENSMUST00000178702 110 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Gm3551-201ENSMUST00000190750 664 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn1aA2APX8 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.3□□□□□ -0.44
Scn1aA2APX8 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms