Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm14644-201ENSMUST00000116671 647 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm12241-201ENSMUST00000118330 726 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm31256-201ENSMUST00000194705 506 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm5186-201ENSMUST00000218781 920 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm25857-201ENSMUST00000082788 129 ntBASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc194A0A140LIT1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Gm11700-201ENSMUST00000119409 403 ntBASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Gm18893-201ENSMUST00000198416 943 ntBASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc194A0A140LIT1 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Gm12015-201ENSMUST00000117065 843 ntBASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Gm19187-201ENSMUST00000206781 892 ntBASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc194A0A140LIT1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms