Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm38157-201ENSMUST00000194178 1698 ntBASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm8706-201ENSMUST00000197372 1491 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm8320-201ENSMUST00000177584 1762 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm8303-201ENSMUST00000178371 1762 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm8331-201ENSMUST00000178433 1762 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Dopey2-207ENSMUST00000227156 7340 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm10434-201ENSMUST00000101158 471 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm8801-201ENSMUST00000173255 1064 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 AC154462.2-201ENSMUST00000227519 370 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm10478-201ENSMUST00000084451 396 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm19165-201ENSMUST00000204453 1982 ntBASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav6n-6A0A075B6B2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -1
Trav6n-6A0A075B6B2 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC8.84□□□□□ -1
Trav6n-6A0A075B6B2 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Trav6n-6A0A075B6B2 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav6n-6A0A075B6B2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav6n-6A0A075B6B2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav6n-6A0A075B6B2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms