Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
ClcnkaQ9WUB7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm25890-201ENSMUST00000177643 165 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm22614-201ENSMUST00000178300 165 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm22042-201ENSMUST00000082989 165 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm26110-201ENSMUST00000083971 165 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.94□□□□□ -0.66
ClcnkaQ9WUB7 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm13296-201ENSMUST00000117854 997 ntBASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm15610-201ENSMUST00000120584 195 ntBASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm13665-201ENSMUST00000120830 528 ntBASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm12164-201ENSMUST00000121695 551 ntBASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm25700-201ENSMUST00000177693 110 ntBASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.93□□□□□ -0.66
ClcnkaQ9WUB7 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms