Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Prpf40aQ9R1C7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf40aQ9R1C7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf40aQ9R1C7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.08□□□□□ -0.31
Prpf40aQ9R1C7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Gm6546-201ENSMUST00000192096 766 ntBASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.08□□□□□ -0.32
Prpf40aQ9R1C7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Mir877-201ENSMUST00000104738 85 ntBASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Gm25700-201ENSMUST00000177693 110 ntBASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf40aQ9R1C7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm14130-201ENSMUST00000118417 987 ntBASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm14126-201ENSMUST00000122345 395 ntBASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Prpf40aQ9R1C7 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms