Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk3aQ9JKX8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Gm24891-201ENSMUST00000104391 136 ntBASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Gm7851-201ENSMUST00000117574 323 ntBASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Gm45113-201ENSMUST00000207518 165 ntBASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Upk3aQ9JKX8 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Gm14058-201ENSMUST00000116082 735 ntBASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Gm13263-201ENSMUST00000121271 838 ntBASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Gm18065-201ENSMUST00000221395 526 ntBASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk3aQ9JKX8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms