Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
U2af1Q9D883 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC15.55■□□□□ 0.08
U2af1Q9D883 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.54■□□□□ 0.08
U2af1Q9D883 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.54■□□□□ 0.08
U2af1Q9D883 Gm37986-201ENSMUST00000193285 383 ntBASIC15.54■□□□□ 0.08
U2af1Q9D883 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Gm8959-201ENSMUST00000213150 571 ntBASIC15.54■□□□□ 0.08
U2af1Q9D883 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.54■□□□□ 0.08
U2af1Q9D883 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
U2af1Q9D883 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
U2af1Q9D883 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
U2af1Q9D883 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
U2af1Q9D883 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
U2af1Q9D883 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
U2af1Q9D883 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.53■□□□□ 0.08
U2af1Q9D883 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Gm8731-201ENSMUST00000118088 412 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 Gm11783-201ENSMUST00000119549 885 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 Gm13408-201ENSMUST00000119822 798 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 Gm13935-201ENSMUST00000121859 798 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC15.53■□□□□ 0.08
U2af1Q9D883 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
U2af1Q9D883 Gm9211-201ENSMUST00000182882 975 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 Mir7686-201ENSMUST00000200604 57 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 Gm43947-201ENSMUST00000203019 959 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 Gm45118-201ENSMUST00000208928 825 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
U2af1Q9D883 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
U2af1Q9D883 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.53■□□□□ 0.08
U2af1Q9D883 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
U2af1Q9D883 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC15.52■□□□□ 0.08
U2af1Q9D883 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
U2af1Q9D883 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.52■□□□□ 0.08
U2af1Q9D883 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.52■□□□□ 0.08
U2af1Q9D883 Gm22902-201ENSMUST00000158488 302 ntBASIC15.52■□□□□ 0.08
U2af1Q9D883 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC15.52■□□□□ 0.08
U2af1Q9D883 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.52■□□□□ 0.08
U2af1Q9D883 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
U2af1Q9D883 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
U2af1Q9D883 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.52■□□□□ 0.08
U2af1Q9D883 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
U2af1Q9D883 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
U2af1Q9D883 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
U2af1Q9D883 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
U2af1Q9D883 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
U2af1Q9D883 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
U2af1Q9D883 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
U2af1Q9D883 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC15.51■□□□□ 0.07
U2af1Q9D883 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
U2af1Q9D883 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms