Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem54Q9D7S1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem54Q9D7S1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem54Q9D7S1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem54Q9D7S1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tmem54Q9D7S1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem54Q9D7S1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.39□□□□□ -0.75
Tmem54Q9D7S1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.39□□□□□ -0.75
Tmem54Q9D7S1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tmem54Q9D7S1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm15515-201ENSMUST00000117827 822 ntBASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm11663-201ENSMUST00000117888 290 ntBASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm14724-201ENSMUST00000118400 537 ntBASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm8566-201ENSMUST00000120174 465 ntBASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm27530-201ENSMUST00000184096 98 ntBASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Mir6927-201ENSMUST00000184494 71 ntBASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm21811-201ENSMUST00000096485 930 ntBASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tmem54Q9D7S1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm4909-201ENSMUST00000118749 794 ntBASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm12501-201ENSMUST00000119163 529 ntBASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm8100-201ENSMUST00000182906 988 ntBASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm38117-201ENSMUST00000194653 939 ntBASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm2965-201ENSMUST00000198365 343 ntBASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.37□□□□□ -0.75
Tmem54Q9D7S1 Gm19208-201ENSMUST00000213861 912 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms