Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Stag1Q9D3E6 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Stag1Q9D3E6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm11451-201ENSMUST00000118946 630 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm1848-201ENSMUST00000120711 789 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm12516-201ENSMUST00000120819 385 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm9192-201ENSMUST00000183221 985 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm34023-201ENSMUST00000195539 217 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm43852-201ENSMUST00000202098 917 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm7940-201ENSMUST00000218195 769 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Stag1Q9D3E6 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm28937-201ENSMUST00000185413 695 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm29400-201ENSMUST00000187208 695 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm28662-201ENSMUST00000188446 695 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm28251-201ENSMUST00000188835 695 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm37318-201ENSMUST00000194325 695 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm38017-201ENSMUST00000194768 695 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm37287-201ENSMUST00000195449 695 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Gm37793-201ENSMUST00000195548 695 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.1□□□□□ -0.15
Stag1Q9D3E6 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Stag1Q9D3E6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms