Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Gm11700-201ENSMUST00000119409 403 ntBASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Gm26083-201ENSMUST00000157904 193 ntBASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Gm44262-201ENSMUST00000204969 372 ntBASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Gm2553-201ENSMUST00000215986 605 ntBASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ddx56Q9D0R4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ddx56Q9D0R4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Gm8343-201ENSMUST00000182705 994 ntBASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Gm45433-201ENSMUST00000209386 247 ntBASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Gm4157-201ENSMUST00000211647 679 ntBASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ddx56Q9D0R4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms