Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm23912-201ENSMUST00000104687 87 ntBASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm13829-201ENSMUST00000119600 138 ntBASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm13342-201ENSMUST00000121055 207 ntBASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm18584-201ENSMUST00000203098 964 ntBASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm39404-201ENSMUST00000216350 313 ntBASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Thoc7-209ENSMUST00000225325 765 ntBASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm10268-201ENSMUST00000085340 555 ntBASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim13Q9CYB0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.94□□□□□ -0.66
Trim13Q9CYB0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Gm37720-201ENSMUST00000195497 1241 ntBASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Gm6266-201ENSMUST00000203844 806 ntBASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trim13Q9CYB0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim13Q9CYB0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms