Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Mir1247-201ENSMUST00000116706 82 ntBASIC11.73□□□□□ -0.53
Ssu72Q9CY97 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Gm2546-201ENSMUST00000182630 991 ntBASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Gm43966-201ENSMUST00000203301 612 ntBASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ssu72Q9CY97 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ssu72Q9CY97 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms