Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm14247-201ENSMUST00000120950 237 ntBASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm8738-201ENSMUST00000172606 329 ntBASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm27847-201ENSMUST00000183711 107 ntBASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm27375-201ENSMUST00000183799 107 ntBASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm5035-201ENSMUST00000215581 927 ntBASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Krt88Q9CPR6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Gm11700-201ENSMUST00000119409 403 ntBASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Gm14999-201ENSMUST00000121039 624 ntBASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Rprl1-201ENSMUST00000158050 327 ntBASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Gm42937-201ENSMUST00000197360 752 ntBASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Gm17931-201ENSMUST00000208132 634 ntBASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Gm807-202ENSMUST00000224929 408 ntBASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Krt88Q9CPR6 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms