Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Gm38341-201ENSMUST00000195357 515 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Gm43630-201ENSMUST00000201550 776 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Gm3961-201ENSMUST00000204425 994 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Gm32390-201ENSMUST00000212713 1172 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim11Q99PQ2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Gm14381-201ENSMUST00000122105 414 ntBASIC13.48□□□□□ -0.25
Trim11Q99PQ2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim11Q99PQ2 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm24255-201ENSMUST00000104481 128 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm13296-201ENSMUST00000117854 997 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm15276-201ENSMUST00000145953 498 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm20482-202ENSMUST00000174729 825 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gm13097-201ENSMUST00000210722 397 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms