Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.57□□□□□ -0.08
Trim34aQ99PP6 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim34aQ99PP6 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm11340-201ENSMUST00000119226 412 ntBASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm12628-201ENSMUST00000122193 382 ntBASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm5982-201ENSMUST00000196234 512 ntBASIC14.56□□□□□ -0.08
Trim34aQ99PP6 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim34aQ99PP6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm7741-201ENSMUST00000181445 989 ntBASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Mir8093-201ENSMUST00000185043 137 ntBASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm5100-201ENSMUST00000195631 589 ntBASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm5298-201ENSMUST00000201122 892 ntBASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim34aQ99PP6 Gm23105-201ENSMUST00000083719 134 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 176.6 ms