Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.69□□□□□ -0.54
Cdh23Q99PF4 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Gm25148-201ENSMUST00000104611 123 ntBASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Gm7242-201ENSMUST00000221134 705 ntBASIC11.69□□□□□ -0.54
Cdh23Q99PF4 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.69□□□□□ -0.54
Cdh23Q99PF4 Gm15373-201ENSMUST00000121495 214 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm20091-201ENSMUST00000179683 189 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm27316-201ENSMUST00000184884 277 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm8643-201ENSMUST00000195228 625 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 BB187690-201ENSMUST00000198619 1176 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm15528-201ENSMUST00000117821 864 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm14829-201ENSMUST00000121499 1138 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm4705-201ENSMUST00000177415 354 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm7928-201ENSMUST00000181249 701 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm16228-201ENSMUST00000162286 809 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm24312-201ENSMUST00000178677 119 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cdh23Q99PF4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh23Q99PF4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh23Q99PF4 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh23Q99PF4 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh23Q99PF4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.67□□□□□ -0.54
Cdh23Q99PF4 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh23Q99PF4 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cdh23Q99PF4 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC11.67□□□□□ -0.54
Cdh23Q99PF4 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms