Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Gm45865-201ENSMUST00000211815 945 ntBASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Gm26232-201ENSMUST00000083360 166 ntBASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm23270-201ENSMUST00000104055 131 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm15547-201ENSMUST00000122152 333 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm31256-201ENSMUST00000194705 506 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm21769-201ENSMUST00000211922 111 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf111Q99ML9 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Btrc-209ENSMUST00000224478 2194 ntBASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf111Q99ML9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms