Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm14807-201ENSMUST00000116640 983 ntBASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm7541-201ENSMUST00000118361 535 ntBASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm15036-201ENSMUST00000118880 400 ntBASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm7150-201ENSMUST00000122032 981 ntBASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm38117-201ENSMUST00000194653 939 ntBASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx6-1Q99MA9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Gm37981-201ENSMUST00000194280 535 ntBASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Gm44315-201ENSMUST00000203041 219 ntBASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Gm8342-201ENSMUST00000209839 757 ntBASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.15□□□□□ -0.62
Nkx6-1Q99MA9 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms