Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm26083-201ENSMUST00000157904 193 ntBASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm27390-201ENSMUST00000184516 176 ntBASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm8712-201ENSMUST00000221090 701 ntBASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm24255-201ENSMUST00000104481 128 ntBASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm42599-201ENSMUST00000201308 469 ntBASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chmp1b1Q99LU0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Chmp1b1Q99LU0 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Chmp1b1Q99LU0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms