Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm5870-201ENSMUST00000196461 282 ntBASIC14.59□□□□□ -0.07
RtcbQ99LF4 Gm17825-201ENSMUST00000206836 794 ntBASIC14.59□□□□□ -0.07
RtcbQ99LF4 Gm45856-201ENSMUST00000212752 416 ntBASIC14.59□□□□□ -0.07
RtcbQ99LF4 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Map1b-203ENSMUST00000223725 2669 ntBASIC14.59□□□□□ -0.07
RtcbQ99LF4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
RtcbQ99LF4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RtcbQ99LF4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RtcbQ99LF4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.58□□□□□ -0.07
RtcbQ99LF4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RtcbQ99LF4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.58□□□□□ -0.08
RtcbQ99LF4 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.58□□□□□ -0.08
RtcbQ99LF4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Gm11500-201ENSMUST00000118237 601 ntBASIC14.58□□□□□ -0.08
RtcbQ99LF4 Gm14213-201ENSMUST00000119778 768 ntBASIC14.58□□□□□ -0.08
RtcbQ99LF4 Gm14993-201ENSMUST00000121180 164 ntBASIC14.58□□□□□ -0.08
RtcbQ99LF4 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Gm5700-201ENSMUST00000191483 989 ntBASIC14.58□□□□□ -0.08
RtcbQ99LF4 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.58□□□□□ -0.08
RtcbQ99LF4 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.58□□□□□ -0.08
RtcbQ99LF4 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.58□□□□□ -0.08
RtcbQ99LF4 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RtcbQ99LF4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.57□□□□□ -0.08
RtcbQ99LF4 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.57□□□□□ -0.08
RtcbQ99LF4 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Gm6114-201ENSMUST00000182472 968 ntBASIC14.57□□□□□ -0.08
RtcbQ99LF4 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.57□□□□□ -0.08
RtcbQ99LF4 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Gm5996-201ENSMUST00000211110 718 ntBASIC14.57□□□□□ -0.08
RtcbQ99LF4 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC14.57□□□□□ -0.08
RtcbQ99LF4 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.57□□□□□ -0.08
RtcbQ99LF4 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.57□□□□□ -0.08
RtcbQ99LF4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.57□□□□□ -0.08
RtcbQ99LF4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RtcbQ99LF4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RtcbQ99LF4 Gm11619-201ENSMUST00000117474 237 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms