Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.93□□□□□ -0.5
Cdk9Q99J95 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Gm12036-201ENSMUST00000120008 530 ntBASIC11.93□□□□□ -0.5
Cdk9Q99J95 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.93□□□□□ -0.5
Cdk9Q99J95 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Gm40466-201ENSMUST00000212174 422 ntBASIC11.93□□□□□ -0.5
Cdk9Q99J95 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdk9Q99J95 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Gm24830-201ENSMUST00000102024 166 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Gm12314-201ENSMUST00000118104 538 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 Gm16177-201ENSMUST00000120728 718 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Snora78-201ENSMUST00000158630 128 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Gm45930-201ENSMUST00000221330 292 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Gm26232-201ENSMUST00000083360 166 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.92□□□□□ -0.5
Cdk9Q99J95 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cdk9Q99J95 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk9Q99J95 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms