Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clip1Q922J3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clip1Q922J3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clip1Q922J3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clip1Q922J3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clip1Q922J3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clip1Q922J3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Clip1Q922J3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC18.42■□□□□ 0.54
Clip1Q922J3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC18.42■□□□□ 0.54
Clip1Q922J3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Gm11422-201ENSMUST00000118925 1103 ntBASIC18.42■□□□□ 0.54
Clip1Q922J3 Gm25492-201ENSMUST00000157383 129 ntBASIC18.42■□□□□ 0.54
Clip1Q922J3 Gm9116-201ENSMUST00000192400 1018 ntBASIC18.42■□□□□ 0.54
Clip1Q922J3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC18.42■□□□□ 0.54
Clip1Q922J3 Gm30671-201ENSMUST00000214898 318 ntBASIC18.42■□□□□ 0.54
Clip1Q922J3 CT009536.2-201ENSMUST00000225370 665 ntBASIC18.42■□□□□ 0.54
Clip1Q922J3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clip1Q922J3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Gm44831-201ENSMUST00000208469 2989 ntBASIC18.41■□□□□ 0.54
Clip1Q922J3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC18.41■□□□□ 0.54
Clip1Q922J3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Gm15549-201ENSMUST00000121595 622 ntBASIC18.41■□□□□ 0.54
Clip1Q922J3 Gm10169-201ENSMUST00000121822 348 ntBASIC18.41■□□□□ 0.54
Clip1Q922J3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC18.41■□□□□ 0.54
Clip1Q922J3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC18.41■□□□□ 0.54
Clip1Q922J3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC18.41■□□□□ 0.54
Clip1Q922J3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clip1Q922J3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
Clip1Q922J3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Gm8899-201ENSMUST00000214635 1332 ntBASIC18.4■□□□□ 0.54
Clip1Q922J3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC18.4■□□□□ 0.54
Clip1Q922J3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Gm8197-202ENSMUST00000193422 934 ntBASIC18.4■□□□□ 0.54
Clip1Q922J3 Gm38314-201ENSMUST00000195709 625 ntBASIC18.4■□□□□ 0.54
Clip1Q922J3 Gm3726-201ENSMUST00000203110 785 ntBASIC18.4■□□□□ 0.54
Clip1Q922J3 Gm4811-201ENSMUST00000220879 1220 ntBASIC18.4■□□□□ 0.54
Clip1Q922J3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC18.4■□□□□ 0.54
Clip1Q922J3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clip1Q922J3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC18.4■□□□□ 0.54
Clip1Q922J3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms