Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gm15573-201ENSMUST00000119487 540 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gm25517-201ENSMUST00000083865 134 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.73□□□□□ -0.21
Smc1bQ920F6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Gm22138-201ENSMUST00000158748 128 ntBASIC13.72□□□□□ -0.21
Smc1bQ920F6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.72□□□□□ -0.21
Smc1bQ920F6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.72□□□□□ -0.21
Smc1bQ920F6 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smc1bQ920F6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.71□□□□□ -0.21
Smc1bQ920F6 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.71□□□□□ -0.21
Smc1bQ920F6 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Smc1bQ920F6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Gm43184-201ENSMUST00000197247 542 ntBASIC13.71□□□□□ -0.21
Smc1bQ920F6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Gm807-202ENSMUST00000224929 408 ntBASIC13.71□□□□□ -0.21
Smc1bQ920F6 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.71□□□□□ -0.21
Smc1bQ920F6 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smc1bQ920F6 Gm26448-201ENSMUST00000082446 203 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms