Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Gm14130-201ENSMUST00000118417 987 ntBASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Gm45433-201ENSMUST00000209386 247 ntBASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Gm37666-201ENSMUST00000194110 866 ntBASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Gm44262-201ENSMUST00000204969 372 ntBASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb1Q91Y08 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Gm26083-201ENSMUST00000157904 193 ntBASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Gm4857-201ENSMUST00000192718 785 ntBASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Gm9797-202ENSMUST00000218003 294 ntBASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb1Q91Y08 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 243.4 ms