Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm28937-201ENSMUST00000185413 695 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm29400-201ENSMUST00000187208 695 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm28662-201ENSMUST00000188446 695 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm28251-201ENSMUST00000188835 695 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm37318-201ENSMUST00000194325 695 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm38017-201ENSMUST00000194768 695 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm37287-201ENSMUST00000195449 695 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm37793-201ENSMUST00000195548 695 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm43002-201ENSMUST00000200310 155 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm26448-201ENSMUST00000082446 203 ntBASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb6Q91XZ4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Pcdhb6Q91XZ4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Gm15711-201ENSMUST00000118889 535 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Mir7677-201ENSMUST00000184226 67 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Gm28071-201ENSMUST00000190355 478 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Gm45186-201ENSMUST00000206874 478 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb6Q91XZ4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms