Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Vsx1Q91V10 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Vsx1Q91V10 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.74□□□□□ -0.53
Vsx1Q91V10 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm24398-201ENSMUST00000157870 109 ntBASIC11.74□□□□□ -0.53
Vsx1Q91V10 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Mir6407-201ENSMUST00000184510 101 ntBASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm4604-201ENSMUST00000025040 390 ntBASIC11.74□□□□□ -0.53
Vsx1Q91V10 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.74□□□□□ -0.53
Vsx1Q91V10 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.74□□□□□ -0.53
Vsx1Q91V10 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.74□□□□□ -0.53
Vsx1Q91V10 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vsx1Q91V10 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Mir671-201ENSMUST00000102432 98 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 Gm12783-201ENSMUST00000121425 397 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 Gm12164-201ENSMUST00000121695 551 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 Gm8956-201ENSMUST00000203939 825 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.73□□□□□ -0.53
Vsx1Q91V10 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vsx1Q91V10 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms