Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
StrcQ8VIM6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
StrcQ8VIM6 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.73□□□□□ -0.21
StrcQ8VIM6 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm6755-201ENSMUST00000100598 864 ntBASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm6740-201ENSMUST00000100617 864 ntBASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm12470-201ENSMUST00000117239 1049 ntBASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm27316-201ENSMUST00000184884 277 ntBASIC13.72□□□□□ -0.21
StrcQ8VIM6 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm7445-201ENSMUST00000192115 340 ntBASIC13.72□□□□□ -0.21
StrcQ8VIM6 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Nsmce2-203ENSMUST00000227173 1122 ntBASIC13.72□□□□□ -0.21
StrcQ8VIM6 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
StrcQ8VIM6 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.72□□□□□ -0.21
StrcQ8VIM6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm8968-201ENSMUST00000199133 1303 ntBASIC13.71□□□□□ -0.21
StrcQ8VIM6 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm24933-201ENSMUST00000103762 110 ntBASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm23252-201ENSMUST00000103776 110 ntBASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm11473-201ENSMUST00000118980 359 ntBASIC13.71□□□□□ -0.21
StrcQ8VIM6 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm26443-201ENSMUST00000179610 110 ntBASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm26875-201ENSMUST00000181006 950 ntBASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.71□□□□□ -0.21
StrcQ8VIM6 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
StrcQ8VIM6 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.71□□□□□ -0.21
StrcQ8VIM6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Gm7833-201ENSMUST00000183288 990 ntBASIC13.71□□□□□ -0.22
StrcQ8VIM6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
StrcQ8VIM6 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
StrcQ8VIM6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC13.7□□□□□ -0.22
StrcQ8VIM6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
StrcQ8VIM6 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms