Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm11783-201ENSMUST00000119549 885 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm28937-201ENSMUST00000185413 695 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm29400-201ENSMUST00000187208 695 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm28662-201ENSMUST00000188446 695 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm28251-201ENSMUST00000188835 695 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm37318-201ENSMUST00000194325 695 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm38017-201ENSMUST00000194768 695 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm37287-201ENSMUST00000195449 695 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm37793-201ENSMUST00000195548 695 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm42752-201ENSMUST00000198394 1106 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm7940-201ENSMUST00000218195 769 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.72□□□□□ -0.37
TraipQ8VIG6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TraipQ8VIG6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.71□□□□□ -0.37
TraipQ8VIG6 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.71□□□□□ -0.37
TraipQ8VIG6 Gm14460-201ENSMUST00000121511 639 ntBASIC12.71□□□□□ -0.37
TraipQ8VIG6 Gm4726-201ENSMUST00000135604 736 ntBASIC12.71□□□□□ -0.37
TraipQ8VIG6 Gm6019-201ENSMUST00000148369 736 ntBASIC12.71□□□□□ -0.37
TraipQ8VIG6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Gm18164-201ENSMUST00000213769 927 ntBASIC12.71□□□□□ -0.37
TraipQ8VIG6 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.71□□□□□ -0.37
TraipQ8VIG6 Gm18166-201ENSMUST00000215557 927 ntBASIC12.71□□□□□ -0.37
TraipQ8VIG6 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.71□□□□□ -0.37
TraipQ8VIG6 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.71□□□□□ -0.37
TraipQ8VIG6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TraipQ8VIG6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.71□□□□□ -0.38
TraipQ8VIG6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TraipQ8VIG6 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.71□□□□□ -0.38
TraipQ8VIG6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Map1b-203ENSMUST00000223725 2669 ntBASIC12.7□□□□□ -0.38
TraipQ8VIG6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TraipQ8VIG6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms