Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim60Q8VI40 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.23□□□□□ -0.45
Trim60Q8VI40 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.23□□□□□ -0.45
Trim60Q8VI40 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Gm23931-201ENSMUST00000103842 109 ntBASIC12.23□□□□□ -0.45
Trim60Q8VI40 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Gm11793-201ENSMUST00000120433 981 ntBASIC12.23□□□□□ -0.45
Trim60Q8VI40 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.23□□□□□ -0.45
Trim60Q8VI40 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim60Q8VI40 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Gm19309-201ENSMUST00000218295 205 ntBASIC12.23□□□□□ -0.45
Trim60Q8VI40 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.23□□□□□ -0.45
Trim60Q8VI40 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.23□□□□□ -0.45
Trim60Q8VI40 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.23□□□□□ -0.45
Trim60Q8VI40 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim60Q8VI40 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.22□□□□□ -0.45
Trim60Q8VI40 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gm12015-201ENSMUST00000117065 843 ntBASIC12.22□□□□□ -0.45
Trim60Q8VI40 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gm15547-201ENSMUST00000122152 333 ntBASIC12.22□□□□□ -0.45
Trim60Q8VI40 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gm19287-201ENSMUST00000203190 358 ntBASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.22□□□□□ -0.45
Trim60Q8VI40 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim60Q8VI40 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.21□□□□□ -0.45
Trim60Q8VI40 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms