Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Top1mtQ8R4U6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.15□□□□□ -0.14
Top1mtQ8R4U6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Top1mtQ8R4U6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Top1mtQ8R4U6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Top1mtQ8R4U6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Rubie-203ENSMUST00000227803 2430 ntBASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Gm43184-201ENSMUST00000197247 542 ntBASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Top1mtQ8R4U6 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Gm23949-201ENSMUST00000104027 127 ntBASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Gm12380-201ENSMUST00000119012 544 ntBASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Mir6420-201ENSMUST00000185032 102 ntBASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Gm2553-201ENSMUST00000215986 605 ntBASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Top1mtQ8R4U6 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm15711-201ENSMUST00000118889 535 ntBASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm28071-201ENSMUST00000190355 478 ntBASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm270-201ENSMUST00000223010 976 ntBASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Top1mtQ8R4U6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Top1mtQ8R4U6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Top1mtQ8R4U6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms