Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Nup35Q8R4R6 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup35Q8R4R6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nup35Q8R4R6 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup35Q8R4R6 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Nup35Q8R4R6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup35Q8R4R6 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Nup35Q8R4R6 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nup35Q8R4R6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.64□□□□□ -0.87
Nup35Q8R4R6 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Gm24548-201ENSMUST00000158650 108 ntBASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Gm10254-201ENSMUST00000052888 867 ntBASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nup35Q8R4R6 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.62□□□□□ -0.87
Nup35Q8R4R6 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Gm38314-201ENSMUST00000195709 625 ntBASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Gm43818-201ENSMUST00000200605 466 ntBASIC9.62□□□□□ -0.87
Nup35Q8R4R6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Gm9996-201ENSMUST00000070359 913 ntBASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nup35Q8R4R6 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms