Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gm7593-201ENSMUST00000187246 644 ntBASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 CT009536.2-201ENSMUST00000225370 665 ntBASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 AC102368.1-201ENSMUST00000227161 892 ntBASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 AC136376.2-201ENSMUST00000228819 490 ntBASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp7Q8R1T1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Gm25766-201ENSMUST00000104101 131 ntBASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Gm5982-201ENSMUST00000196234 512 ntBASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Gm23105-201ENSMUST00000083719 134 ntBASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chmp7Q8R1T1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gm6548-201ENSMUST00000167498 1165 ntBASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Mir8093-201ENSMUST00000185043 137 ntBASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 AC118639.2-201ENSMUST00000226289 223 ntBASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chmp7Q8R1T1 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms