Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trim68Q8K243 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.91□□□□□ -0.34
Trim68Q8K243 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.91□□□□□ -0.34
Trim68Q8K243 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim68Q8K243 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim68Q8K243 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.91□□□□□ -0.34
Trim68Q8K243 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.91□□□□□ -0.34
Trim68Q8K243 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim68Q8K243 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim68Q8K243 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim68Q8K243 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim68Q8K243 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Trim68Q8K243 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trim68Q8K243 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm13047-201ENSMUST00000117116 815 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm4726-201ENSMUST00000135604 736 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm6019-201ENSMUST00000148369 736 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim68Q8K243 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm2517-201ENSMUST00000215651 348 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm5455-201ENSMUST00000058710 715 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim68Q8K243 Snora73b-201ENSMUST00000083419 205 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.9□□□□□ -0.34
Trim68Q8K243 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trim68Q8K243 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim68Q8K243 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim68Q8K243 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim68Q8K243 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim68Q8K243 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim68Q8K243 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.89□□□□□ -0.35
Trim68Q8K243 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Gm24934-201ENSMUST00000103764 111 ntBASIC12.89□□□□□ -0.35
Trim68Q8K243 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 Gm13809-201ENSMUST00000117921 597 ntBASIC12.89□□□□□ -0.35
Trim68Q8K243 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.89□□□□□ -0.35
Trim68Q8K243 Gm8199-201ENSMUST00000121323 823 ntBASIC12.89□□□□□ -0.35
Trim68Q8K243 Gm23085-201ENSMUST00000157849 293 ntBASIC12.89□□□□□ -0.35
Trim68Q8K243 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.89□□□□□ -0.35
Trim68Q8K243 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim68Q8K243 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Gm43184-201ENSMUST00000197247 542 ntBASIC12.89□□□□□ -0.35
Trim68Q8K243 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Gm10288-201ENSMUST00000084614 537 ntBASIC12.89□□□□□ -0.35
Trim68Q8K243 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim68Q8K243 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim68Q8K243 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms