Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup88Q8CEC0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Gm14263-201ENSMUST00000117955 746 ntBASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Gm17812-201ENSMUST00000204935 318 ntBASIC13.99□□□□□ -0.17
Nup88Q8CEC0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup88Q8CEC0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Gm11331-201ENSMUST00000119764 288 ntBASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.98□□□□□ -0.17
Nup88Q8CEC0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.98□□□□□ -0.17
Nup88Q8CEC0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup88Q8CEC0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Gm42937-201ENSMUST00000197360 752 ntBASIC13.97□□□□□ -0.17
Nup88Q8CEC0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 AU022133-201ENSMUST00000200601 873 ntBASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup88Q8CEC0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms