Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm12058-201ENSMUST00000118614 437 ntBASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm13875-201ENSMUST00000120162 282 ntBASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm13570-201ENSMUST00000140763 309 ntBASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Mir3102-201ENSMUST00000175555 104 ntBASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm27320-201ENSMUST00000184892 109 ntBASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc87Q8CDL9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gm24255-201ENSMUST00000104481 128 ntBASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gm11439-201ENSMUST00000118598 409 ntBASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gm37201-201ENSMUST00000191845 523 ntBASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gm17931-201ENSMUST00000208132 634 ntBASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc87Q8CDL9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 BC043934-202ENSMUST00000185694 2356 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms