Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lysmd4Q8CC84 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lysmd4Q8CC84 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Lysmd4Q8CC84 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Gm25043-201ENSMUST00000158604 212 ntBASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Gm42627-201ENSMUST00000197347 224 ntBASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.58□□□□□ -0.72
Lysmd4Q8CC84 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms