Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa4Q8CA71 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm15374-201ENSMUST00000119313 844 ntBASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm17391-201ENSMUST00000171036 126 ntBASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm10731-201ENSMUST00000181171 448 ntBASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm19891-201ENSMUST00000189771 303 ntBASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Paupar-201ENSMUST00000194826 3482 ntBASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Shisa4Q8CA71 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm11340-201ENSMUST00000119226 412 ntBASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm22144-201ENSMUST00000157402 102 ntBASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm43916-201ENSMUST00000205062 967 ntBASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.68□□□□□ -0.22
Shisa4Q8CA71 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa4Q8CA71 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Gm22920-201ENSMUST00000102175 109 ntBASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Gm12419-201ENSMUST00000116649 636 ntBASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Gm38210-201ENSMUST00000191944 809 ntBASIC13.67□□□□□ -0.22
Shisa4Q8CA71 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Gm17825-201ENSMUST00000206836 794 ntBASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.67□□□□□ -0.22
Shisa4Q8CA71 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms