Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Gm12407-201ENSMUST00000180219 324 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Gm44506-201ENSMUST00000206278 965 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Gm4978-201ENSMUST00000071565 801 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Pck2-205ENSMUST00000226352 2784 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.78□□□□□ -0.2
Alx1Q8C8B0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Alx1Q8C8B0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Alx1Q8C8B0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Alx1Q8C8B0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Alx1Q8C8B0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Alx1Q8C8B0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Alx1Q8C8B0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Gm15352-201ENSMUST00000118696 270 ntBASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Gm44100-201ENSMUST00000204329 436 ntBASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.77□□□□□ -0.21
Alx1Q8C8B0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Nsd1-205ENSMUST00000224693 852 ntBASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Lect2-202ENSMUST00000225183 823 ntBASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Alx1Q8C8B0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Gm14071-201ENSMUST00000117817 509 ntBASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Gm22144-201ENSMUST00000157402 102 ntBASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Gm20495-201ENSMUST00000173902 235 ntBASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Gm18367-201ENSMUST00000176139 600 ntBASIC13.76□□□□□ -0.21
Alx1Q8C8B0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.76□□□□□ -0.21
Alx1Q8C8B0 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms