Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Gm27530-201ENSMUST00000184096 98 ntBASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Mir7677-201ENSMUST00000184226 67 ntBASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Gm43002-201ENSMUST00000200310 155 ntBASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Gm45186-201ENSMUST00000206874 478 ntBASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim9Q8C7M3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Paupar-201ENSMUST00000194826 3482 ntBASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trim9Q8C7M3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Gm3332-201ENSMUST00000189337 928 ntBASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Lect2-202ENSMUST00000225183 823 ntBASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim9Q8C7M3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Gm23596-201ENSMUST00000104304 132 ntBASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Mir6420-201ENSMUST00000185032 102 ntBASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim9Q8C7M3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Gm7841-201ENSMUST00000122108 1629 ntBASIC13□□□□□ -0.33
Trim9Q8C7M3 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim9Q8C7M3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms