Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Gm17070-201ENSMUST00000170463 784 ntBASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Gm18968-201ENSMUST00000221319 862 ntBASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Col6a6Q8C6K9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Gm44882-201ENSMUST00000205702 802 ntBASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Col6a6Q8C6K9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Gm10169-201ENSMUST00000121822 348 ntBASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.66□□□□□ -0.7
Col6a6Q8C6K9 Gm18776-201ENSMUST00000188833 654 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms