Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Gm2553-201ENSMUST00000215986 605 ntBASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trub1Q8C0D0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm4310-201ENSMUST00000177847 889 ntBASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm43184-201ENSMUST00000197247 542 ntBASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.19□□□□□ -0.46
Trub1Q8C0D0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trub1Q8C0D0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm12380-201ENSMUST00000119012 544 ntBASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm6450-201ENSMUST00000200896 574 ntBASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm270-201ENSMUST00000223010 976 ntBASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trub1Q8C0D0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trub1Q8C0D0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms