Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm13045-201ENSMUST00000119019 712 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm43138-201ENSMUST00000199123 708 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm9555-201ENSMUST00000200908 583 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup54Q8BTS4 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm13916-201ENSMUST00000117368 628 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm11783-201ENSMUST00000119549 885 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm11960-201ENSMUST00000122068 925 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm19353-201ENSMUST00000184561 445 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm38314-201ENSMUST00000195709 625 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm5982-201ENSMUST00000196234 512 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm43378-201ENSMUST00000199336 582 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup54Q8BTS4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm12579-201ENSMUST00000118040 783 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm11700-201ENSMUST00000119409 403 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms