Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Gm12164-201ENSMUST00000121695 551 ntBASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Gm4607-201ENSMUST00000206649 577 ntBASIC12.14□□□□□ -0.47
Sfr1Q8BP27 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.14□□□□□ -0.47
Sfr1Q8BP27 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Gm5419-201ENSMUST00000119301 527 ntBASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Gm24749-201ENSMUST00000157838 343 ntBASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Gm2260-201ENSMUST00000184965 657 ntBASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.13□□□□□ -0.47
Sfr1Q8BP27 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Gm8956-201ENSMUST00000203939 825 ntBASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sfr1Q8BP27 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Gm12036-201ENSMUST00000120008 530 ntBASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Gm28071-201ENSMUST00000190355 478 ntBASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Gm17827-201ENSMUST00000211825 742 ntBASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sfr1Q8BP27 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms