Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm9192-201ENSMUST00000183221 985 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm28937-201ENSMUST00000185413 695 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm28388-201ENSMUST00000186262 437 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm29400-201ENSMUST00000187208 695 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm28662-201ENSMUST00000188446 695 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm28251-201ENSMUST00000188835 695 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm37318-201ENSMUST00000194325 695 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm38017-201ENSMUST00000194768 695 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm37287-201ENSMUST00000195449 695 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm37793-201ENSMUST00000195548 695 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm19091-201ENSMUST00000208120 978 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Gm19009-201ENSMUST00000223072 823 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcal1Q8BJL0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Gm6114-201ENSMUST00000182472 968 ntBASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Gm37981-201ENSMUST00000194280 535 ntBASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Gm44158-201ENSMUST00000203881 505 ntBASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Gm23680-201ENSMUST00000083162 164 ntBASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Olfr584-201ENSMUST00000098210 964 ntBASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smarcal1Q8BJL0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Gm23272-201ENSMUST00000104053 129 ntBASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Gm12419-201ENSMUST00000116649 636 ntBASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Gm11675-201ENSMUST00000121873 832 ntBASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smarcal1Q8BJL0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms