Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.38□□□□□ -0.59
SynbQ8BI41 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SynbQ8BI41 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm11989-201ENSMUST00000117240 672 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm11628-201ENSMUST00000117568 171 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm11362-201ENSMUST00000118838 850 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 Mir7677-201ENSMUST00000184226 67 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm43962-201ENSMUST00000203898 190 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm44124-201ENSMUST00000204159 472 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm270-201ENSMUST00000223010 976 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
SynbQ8BI41 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
SynbQ8BI41 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SynbQ8BI41 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.38□□□□□ -0.59
SynbQ8BI41 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SynbQ8BI41 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.37□□□□□ -0.59
SynbQ8BI41 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm23251-201ENSMUST00000103773 110 ntBASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm12501-201ENSMUST00000119163 529 ntBASIC11.37□□□□□ -0.59
SynbQ8BI41 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.37□□□□□ -0.59
SynbQ8BI41 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm18304-201ENSMUST00000189162 546 ntBASIC11.37□□□□□ -0.59
SynbQ8BI41 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.37□□□□□ -0.59
SynbQ8BI41 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.37□□□□□ -0.59
SynbQ8BI41 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm45219-201ENSMUST00000205602 465 ntBASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm17827-201ENSMUST00000211825 742 ntBASIC11.37□□□□□ -0.59
SynbQ8BI41 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SynbQ8BI41 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SynbQ8BI41 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.36□□□□□ -0.59
SynbQ8BI41 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.36□□□□□ -0.59
SynbQ8BI41 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms