Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm13786-201ENSMUST00000122371 333 ntBASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm18893-201ENSMUST00000198416 943 ntBASIC11.46□□□□□ -0.57
Rnf38Q8BI21 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Rnf38Q8BI21 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Rnf38Q8BI21 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf38Q8BI21 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Rnf38Q8BI21 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf38Q8BI21 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf38Q8BI21 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rnf38Q8BI21 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf38Q8BI21 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.45□□□□□ -0.58
Rnf38Q8BI21 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Gm7399-201ENSMUST00000032395 858 ntBASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf38Q8BI21 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.44□□□□□ -0.58
Rnf38Q8BI21 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms