Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Gm42937-201ENSMUST00000197360 752 ntBASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Gm44872-201ENSMUST00000207864 420 ntBASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Lect2-202ENSMUST00000225183 823 ntBASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Slc5a7Q8BGY9 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.33□□□□□ -0.75
Slc5a7Q8BGY9 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Erich3-203ENSMUST00000189969 3460 ntBASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Gm7029-201ENSMUST00000173226 450 ntBASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Gm27701-201ENSMUST00000184498 110 ntBASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.33□□□□□ -0.76
Slc5a7Q8BGY9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Gm15610-201ENSMUST00000120584 195 ntBASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc5a7Q8BGY9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms