Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.59□□□□□ -0.39
Trim6Q8BGE7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim6Q8BGE7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.58□□□□□ -0.39
Trim6Q8BGE7 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.58□□□□□ -0.39
Trim6Q8BGE7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim6Q8BGE7 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim6Q8BGE7 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim6Q8BGE7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Gm18711-201ENSMUST00000199341 750 ntBASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Gm7653-201ENSMUST00000214567 508 ntBASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim6Q8BGE7 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim6Q8BGE7 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms